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58
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BMCBI
2008
98views more  BMCBI 2008»
14 years 11 months ago
Assessing probe-specific dye and slide biases in two-color microarray data
Background: A primary reason for using two-color microarrays is that the use of two samples labeled with different dyes on the same slide, that bind to probes on the same spot, is...
Ruixiao Lu, Geun-Cheol Lee, Michael Shultz, Chris ...
BMCBI
2007
104views more  BMCBI 2007»
14 years 11 months ago
A response to Yu et al. "A forward-backward fragment assembling algorithm for the identification of genomic amplification and de
Background: Yu et al. (BMC Bioinformatics 2007,8: 145+) have recently compared the performance of several methods for the detection of genomic amplification and deletion breakpoin...
Oscar M. Rueda, Ramón Díaz-Uriarte
92
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TIT
2008
83views more  TIT 2008»
14 years 11 months ago
Constrained Codes as Networks of Relations
We address the well-known problem of determining the capacity of constrained coding systems. While the onedimensional case is well understood to the extent that there are technique...
Moshe Schwartz, Jehoshua Bruck
BMCBI
2004
106views more  BMCBI 2004»
14 years 11 months ago
Spotting effect in microarray experiments
Background: Microarray data must be normalized because they suffer from multiple biases. We have identified a source of spatial experimental variability that significantly affects...
Tristan Mary-Huard, Jean-Jacques Daudin, Sté...
IPPS
2006
IEEE
15 years 5 months ago
An extensible global address space framework with decoupled task and data abstractions
ions Sriram Krishnamoorthy½ Umit Catalyurek¾ Jarek Nieplocha¿ Atanas Rountev½ P. Sadayappan½ ½ Dept. of Computer Science and Engineering, ¾ Dept. of Biomedical Informatics T...
Sriram Krishnamoorthy, Ümit V. Çataly&...