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SASP
2009
IEEE
291views Hardware» more  SASP 2009»
15 years 8 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
DAC
2009
ACM
16 years 2 months ago
Handling complexities in modern large-scale mixed-size placement
In this paper, we propose an effective algorithm flow to handle largescale mixed-size placement. The basic idea is to use floorplanning to guide the placement of objects at the gl...
Jackey Z. Yan, Natarajan Viswanathan, Chris Chu
DAC
2008
ACM
16 years 2 months ago
Broadcast electrode-addressing for pin-constrained multi-functional digital microfluidic biochips
Recent advances in digital microfluidics have enabled lab-on-a-chip devices for DNA sequencing, immunoassays, clinical chemistry, and protein crystallization. Basic operations suc...
Tao Xu, Krishnendu Chakrabarty
JOT
2007
124views more  JOT 2007»
15 years 1 months ago
Displaying Updated Stock Quotes
This paper describes how to extract stock quote data and display it with a dynamic update (using free, but delayed data streams). As a part of the architecture of the program, we ...
Douglas Lyon
PPSC
1993
15 years 3 months ago
A Matrix Framework for Conjugate Gradient Methods and Some Variants of CG with Less Synchronization Overhead
We will present a matrix framework for the conjugate gradient methods, which is expressed in terms of whole vector sequences instead of single vectors or initial parts of sequence...
Eduardo F. D'Azevedo, Victor Eijkhout, Charles H. ...