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» The Equivalence between Biology and Computation
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102
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ACSC
2010
IEEE
14 years 7 months ago
Average distance as a predictor of synchronisability in networks of coupled oscillators
The importance of networks of coupled oscillators is widely recognized. Such networks occur in biological systems like the heart, in chemical systems, in computational problems, a...
Anthony H. Dekker
108
Voted
ECCB
2008
IEEE
15 years 7 months ago
Connect the dots: exposing hidden protein family connections from the entire sequence tree
Motivation: Mapping of remote evolutionary links is a classic computational problem of much interest. Relating protein families allows for functional and structural inference on u...
Yaniv Loewenstein, Michal Linial
99
Voted
ECAL
2003
Springer
15 years 6 months ago
A Universal Framework for Self-Replication
Abstract. Self-replication is a fundamental property of many interesting physical, formal and biological systems, such as crystals, waves, automata, and especially forms of natural...
Bryant Adams, Hod Lipson
91
Voted
RECOMB
2010
Springer
15 years 6 months ago
SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings
Abstract. We consider the problem of aligning two metabolic pathways. Unlike traditional approaches, we do not restrict the alignment to one-to-one mappings between the molecules o...
Ferhat Ay, Tamer Kahveci
107
Voted
BMCBI
2008
164views more  BMCBI 2008»
15 years 27 days ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke