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» The Equivalence between Biology and Computation
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BIOINFORMATICS
2002
146views more  BIOINFORMATICS 2002»
14 years 11 months ago
A duplication growth model of gene expression networks
Motivation: There has been considerable interest in developing computational techniques for inferring genetic regulatory networks from whole-genome expression profiles. When expre...
Ashish Bhan, David J. Galas, T. Gregory Dewey
JIIS
2002
141views more  JIIS 2002»
14 years 11 months ago
Combining Approximation Techniques and Vector Quantization for Adaptable Similarity Search
Adaptable similarity queries based on quadratic form distance functions are widely popular in data mining application domains including multimedia, CAD, molecular biology or medica...
Christian Böhm, Hans-Peter Kriegel, Thomas Se...
INFORMS
2010
147views more  INFORMS 2010»
14 years 9 months ago
Exact Algorithms for the Quadratic Linear Ordering Problem
The quadratic linear ordering problem naturally generalizes various optimization problems, such as bipartite crossing minimization or the betweenness problem, which includes linear...
Christoph Buchheim, Angelika Wiegele, Lanbo Zheng
BMCBI
2007
144views more  BMCBI 2007»
14 years 12 months ago
Gene analogue finder: a GRID solution for finding functionally analogous gene products
Background: To date more than 2,1 million gene products from more than 100000 different species have been described specifying their function, the processes they are involved in a...
Angelica Tulipano, Giacinto Donvito, Flavio Licciu...
BMCBI
2007
142views more  BMCBI 2007»
14 years 12 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto