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» The Equivalence between Biology and Computation
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BMCBI
2007
144views more  BMCBI 2007»
14 years 12 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
BMCBI
2004
111views more  BMCBI 2004»
14 years 11 months ago
Multiclass discovery in array data
Background: A routine goal in the analysis of microarray data is to identify genes with expression levels that correlate with known classes of experiments. In a growing number of ...
Yingchun Liu, Markus Ringnér
FOCS
2008
IEEE
15 years 6 months ago
What Can We Learn Privately?
Learning problems form an important category of computational tasks that generalizes many of the computations researchers apply to large real-life data sets. We ask: what concept ...
Shiva Prasad Kasiviswanathan, Homin K. Lee, Kobbi ...
BMCBI
2006
120views more  BMCBI 2006»
14 years 12 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
POPL
2011
ACM
14 years 2 months ago
Safe nondeterminism in a deterministic-by-default parallel language
A number of deterministic parallel programming models with strong safety guarantees are emerging, but similar support for nondeterministic algorithms, such as branch and bound sea...
Robert L. Bocchino Jr., Stephen Heumann, Nima Hona...