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» The Equivalence between Biology and Computation
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CIBCB
2007
IEEE
15 years 7 months ago
Motifs and Modules in Fractured Functional Yeast Networks
The integration of diverse data sets into probabilistic functional networks is an active and important area of research in systems biology. In this paper we fracture a previously p...
Jennifer Hallinan, Anil Wipat
ISMB
1993
15 years 2 months ago
Minimizing Complexity in Cellular Automata Models of Self-Replication
Understanding self-replication from an information processing perspective is important because, amongother things, it can shed light on molecular mechanismsof biological reproduct...
James A. Reggia, Hui-Hsien Chou, Steven L. Armentr...
IANDC
2008
84views more  IANDC 2008»
15 years 23 days ago
A theory of system behaviour in the presence of node and link failure
We develop a behavioural theory of distributed programs in the presence of failures such as nodes crashing and links breaking. The framework we use is that of D, a language in whi...
Adrian Francalanza, Matthew Hennessy
ECCB
2008
IEEE
15 years 7 months ago
Functional coherence in domain interaction networks
Motivation: Extracting functional information from protein–protein interactions (PPI) poses significant challenges arising from the noisy, incomplete, generic and static nature...
Jayesh Pandey, Mehmet Koyutürk, Shankar Subra...
ICPR
2008
IEEE
15 years 7 months ago
An extended version of the k-means method for overlapping clustering
This paper deals with overlapping clustering, a trade off between crisp and fuzzy clustering. It has been motivated by recent applications in various domains such as information r...
Guillaume Cleuziou