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» The Equivalence between Biology and Computation
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RECOMB
2002
Springer
16 years 1 months ago
Simulating a Coalescent Process with Recombination and Ascertainment
A new method is presented for use in simulating samples of disease and normal chromosomes bearing multiple linked genetic markers under a neutral model of mutation, genetic drift, ...
Ying Wang, Bruce Rannala
108
Voted
FCCM
2009
IEEE
169views VLSI» more  FCCM 2009»
15 years 7 months ago
RC-BLASTn: Implementation and Evaluation of the BLASTn Scan Function
BLASTn is a tool universally used by biologists to identify similarities between nucleotide based biological genome sequences. This report describes an FPGA based hardware impleme...
Siddhartha Datta, Parag Beeraka, Ron Sass
CJ
2006
100views more  CJ 2006»
15 years 22 days ago
Fuzzifying P Systems
Abstract. Uncertainty is an inherent property of all living systems. Curiously enough, computational models inspired by biological systems do not take, in general, under considerat...
Apostolos Syropoulos
102
Voted
PKDD
2010
Springer
158views Data Mining» more  PKDD 2010»
14 years 11 months ago
Learning Sparse Gaussian Markov Networks Using a Greedy Coordinate Ascent Approach
In this paper, we introduce a simple but efficient greedy algorithm, called SINCO, for the Sparse INverse COvariance selection problem, which is equivalent to learning a sparse Ga...
Katya Scheinberg, Irina Rish
117
Voted
BIBE
2005
IEEE
15 years 6 months ago
Selecting Informative Genes from Microarray Dataset by Incorporating Gene Ontology
Selecting informative genes from microarray experiments is one of the most important data analysis steps for deciphering biological information imbedded in such experiments. Howev...
Xian Xu, Aidong Zhang