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» The Equivalence between Biology and Computation
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119
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TCBB
2011
14 years 7 months ago
Information-Theoretic Model of Evolution over Protein Communication Channel
—In this paper, we propose a communication model of evolution and investigate its information-theoretic bounds. The process of evolution is modeled as the retransmission of infor...
Liuling Gong, Nidhal Bouaynaya, Dan Schonfeld
109
Voted
ENTCS
2006
168views more  ENTCS 2006»
15 years 22 days ago
A Functional Programming Framework for Latency Insensitive Protocol Validation
Latency insensitive protocols (LIPs) have been proposed as a viable means to connect synchronous IP blocks via long interconnects in a system-on-chip. The reason why one needs to ...
Syed Suhaib, Deepak Mathaikutty, Sandeep K. Shukla...
115
Voted
RECOMB
2005
Springer
16 years 1 months ago
Recognition of Binding Patterns Common to a Set of Protein Structures
We present a novel computational method, MultiBind, for recognition of binding patterns common to a set of protein structures. It is the first method which performs a multiple alig...
Maxim Shatsky, Alexandra Shulman-Peleg, Ruth Nussi...
103
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BMCBI
2006
123views more  BMCBI 2006»
15 years 23 days ago
Computational models with thermodynamic and composition features improve siRNA design
Background: Small interfering RNAs (siRNAs) have become an important tool in cell and molecular biology. Reliable design of siRNA molecules is essential for the needs of large fun...
Svetlana A. Shabalina, Alexey N. Spiridonov, Aleks...
117
Voted
KSEM
2007
Springer
15 years 6 months ago
On Defense Strength of Blocking Defeaters in Admissible Sets
Extended argumentation framework is a formalism where defeat relations are determined by establishing a preference between arguments involved in symmetric conflicts. This process ...
Diego C. Martínez, Alejandro Javier Garc&ia...