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» The Equivalence between Biology and Computation
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CONCUR
2009
Springer
15 years 7 months ago
Partially-Commutative Context-Free Processes
Bisimulation equivalence is decidable in polynomial time for both sequential and commutative normed context-free processes, known as BPA and BPP, respectively. Despite apparent sim...
Wojciech Czerwinski, Sibylle B. Fröschle, Sla...
101
Voted
FOSSACS
2004
Springer
15 years 6 months ago
safeDpi: A Language for Controlling Mobile Code
safeDpi is a distributed version of the Picalculus, in which processes are located at dynamically created sites. Parametrised code may be sent between sites using so-called ports, ...
Matthew Hennessy, Julian Rathke, Nobuko Yoshida
ICCS
2005
Springer
15 years 6 months ago
Clustering Using Adaptive Self-organizing Maps (ASOM) and Applications
Abstract. This paper presents an innovative, adaptive variant of Kohonen’s selforganizing maps called ASOM, which is an unsupervised clustering method that adaptively decides on ...
Yong Wang, Chengyong Yang, Kalai Mathee, Giri Nara...
108
Voted
DAGSTUHL
2006
15 years 2 months ago
Static Analysis of a Model of the LDL Degradation Pathway
BioAmbients is a derivative of mobile ambients that has shown promise of describing interesting features of the behaviour of biological systems. As for other ambient calculi static...
Henrik Pilegaard, Hanne Riis Nielson, Flemming Nie...
IJCAI
2001
15 years 2 months ago
Qualitative Simulation of Genetic Regulatory Networks: Method and Application
Computer modeling and simulation are indispensable for understanding the functioning of an organism on a molecular level. We present an implemented method for the qualitative simu...
Hidde de Jong, Michel Page, Céline Hernande...