The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
Motivated by the trend of genome sequencing without completing the sequence of the whole genomes, Mu˜noz et al. recently studied the problem of filling an incomplete multichromos...
Haitao Jiang, Chunfang Zheng, David Sankoff, Binha...
In comparative genomics studies, finding a minimum length sequences of reversals, so called sorting by reversals, has been the topic of a huge literature. Since there are many mini...
During the past ten years, Wyner-Ziv video coding (WZVC) has gained a lot of research interests because of its unique characteristics of "simple encoding, complex decoding&quo...