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BMCBI
2007
165views more  BMCBI 2007»
14 years 10 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf
WWW
2010
ACM
15 years 5 months ago
A scalable machine-learning approach for semi-structured named entity recognition
Named entity recognition studies the problem of locating and classifying parts of free text into a set of predefined categories. Although extensive research has focused on the de...
Utku Irmak, Reiner Kraft
CPAIOR
2009
Springer
15 years 4 months ago
Modelling Search Strategies in Rules2CP
In this abstract, we present a rule-based modelling language for constraint programming, called Rules2CP [1], and a library PKML for modelling packing problems. Unlike other modell...
François Fages, Julien Martin
BMCBI
2006
102views more  BMCBI 2006»
14 years 10 months ago
Predicting population coverage of T-cell epitope-based diagnostics and vaccines
Background: T cells recognize a complex between a specific major histocompatibility complex (MHC) molecule and a particular pathogen-derived epitope. A given epitope will elicit a...
Huynh-Hoa Bui, John Sidney, Kenny Dinh, Scott Sout...
HPCC
2007
Springer
15 years 4 months ago
Optimizing Array Accesses in High Productivity Languages
One of the outcomes of DARPA’s HPCS program has been the creation of three new high productivity languages: Chapel, Fortress, and X10. While these languages have introduced impro...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar