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CODES
2007
IEEE
15 years 11 months ago
Simultaneous synthesis of buses, data mapping and memory allocation for MPSoC
Heterogeneous multiprocessors are emerging as the dominant implementation approach to embedded multiprocessor systems. In addition to having processing elements suited to the targ...
Brett H. Meyer, Donald E. Thomas
CGO
2004
IEEE
15 years 8 months ago
Custom Data Layout for Memory Parallelism
In this paper, we describe a generalized approach to deriving a custom data layout in multiple memory banks for array-based computations, to facilitate high-bandwidth parallel mem...
Byoungro So, Mary W. Hall, Heidi E. Ziegler
BMCBI
2010
155views more  BMCBI 2010»
15 years 5 months ago
BISMA - Fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences
Background: Bisulfite sequencing is a popular method to analyze DNA methylation patterns at high resolution. A region of interest is targeted by PCR and about 20-50 subcloned DNA ...
Christian Rohde, Yingying Zhang, Richard Reinhardt...
BMCBI
2007
156views more  BMCBI 2007»
15 years 5 months ago
Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data
Background: Evolutionary analysis provides a formal framework for comparative analysis of genomic and other data. In evolutionary analysis, observed data are treated as the termin...
Thomas Hladish, Vivek Gopalan, Chengzhi Liang, Wei...
BMCBI
2005
124views more  BMCBI 2005»
15 years 4 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...