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» The Gene Ontology project in 2008
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TSMC
2008
136views more  TSMC 2008»
14 years 9 months ago
Learning Relational Descriptions of Differentially Expressed Gene Groups
Abstract-- This paper presents a method that uses gene ontologies, together with the paradigm of relational subgroup discovery, to find compactly described groups of genes differen...
Igor Trajkovski, Filip Zelezný, Nada Lavrac...
JBI
2008
159views Bioinformatics» more  JBI 2008»
14 years 9 months ago
SEGS: Search for enriched gene sets in microarray data
Gene Ontology (GO) terms are often used to interpret the results of microarray experiments. The most common approach is to perform Fisher's exact tests to find gene sets anno...
Igor Trajkovski, Nada Lavrac, Jakub Tolar
BMCBI
2008
158views more  BMCBI 2008»
14 years 9 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
ESWS
2008
Springer
14 years 11 months ago
Building a National Semantic Web Ontology and Ontology Service Infrastructure -The FinnONTO Approach
Abstract. This paper presents the vision and results of creating a national level cross-domain ontology and ontology service infrastructure in Finland. The novelty of the infrastru...
Eero Hyvönen, Kim Viljanen, Jouni Tuominen, K...
IJBRA
2008
88views more  IJBRA 2008»
14 years 9 months ago
GOSAP: Gene Ontology-Based Semantic Alignment of Biological Pathways
A large number of biological pathways have been assembled in later years, and are being stored in databases. Hence, the need for methods to analyse these pathways has emerged. One ...
Jonas Gamalielsson, Björn Olsson