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BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
15 years 4 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...
BIBM
2008
IEEE
141views Bioinformatics» more  BIBM 2008»
15 years 4 months ago
Protein-Protein Interaction Network Alignment by Quantitative Simulation
We adapt a network simulation algorithm called quantitative simulation (QSim) for use in the alignment of biological networks. Unlike most network alignment methods, QSim finds l...
Perry Evans, Ted Sandler, Lyle H. Ungar
ITNG
2008
IEEE
15 years 4 months ago
GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling
Glycan biosynthesis is the process by which glycans are built in the cells. Information about the process is available from several Web accessible databases, published papers, exp...
Shravya Nimmagadda, Amrita Basu, Matthew Eavenson,...
CBMS
2008
IEEE
15 years 4 months ago
Semantic Visualization of Patient Information
Clinical practice and research rely increasingly on analytic approaches to patient data. Visualization enables the comparative exploration of similar patients, a key requirement i...
Sonja Zillner, Tamas Hauer, Dmitri Rogulin, Alexey...
SEMCO
2008
IEEE
15 years 4 months ago
TcruziKB: Enabling Complex Queries for Genomic Data Exploration
We developed a novel analytical environment to aid in the examination of the extensive amount of interconnected data available for genome projects. Our focus is to enable ity and ...
Pablo N. Mendes, Bobby McKnight, Amit P. Sheth, Je...