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RECOMB
2008
Springer
16 years 5 months ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
RECOMB
2008
Springer
16 years 5 months ago
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information
High-accuracy protein structure modeling demands accurate and very fast side chain prediction since such a procedure must be repeatedly called at each step of structure refinement....
Jing Zhang, Xin Gao, Jinbo Xu, Ming Li
RECOMB
2006
Springer
16 years 5 months ago
Identification and Evaluation of Functional Modules in Gene Co-expression Networks
Abstract. Identifying gene functional modules is an important step towards elucidating gene functions at a global scale. In this paper, we introduce a simple method to construct ge...
Jianhua Ruan, Weixiong Zhang
ICALP
2009
Springer
16 years 5 months ago
High Complexity Tilings with Sparse Errors
Abstract. Tile sets and tilings of the plane appear in many topics ranging from logic (the Entscheidungsproblem) to physics (quasicrystals). The idea is to enforce some global prop...
Bruno Durand, Andrei E. Romashchenko, Alexander Sh...
PERCOM
2005
ACM
16 years 4 months ago
Supporting Topographic Queries in a Class of Networked Sensor Systems
Topographic querying is the process of extracting data from a sensor network for understanding the graphic delineation of features of interest in a terrain. Query processing techn...
Mitali Singh, Viktor K. Prasanna