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    BMCBI
    2005
    147views more  BMCBI 2005»
    GATA: a graphic alignment tool for comparative sequence analysis
    14 years 10 months ago
    GATA: a graphic alignment tool for comparative sequence analysis
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    Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
    David A. Nix, Michael B. Eisen
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    BMCBI
    2005
    251views more  BMCBI 2005»
    Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation
    14 years 10 months ago
    Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation
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    Background: The ability to distinguish between genes and proteins is essential for understanding biological text. Support Vector Machines (SVMs) have been proven to be very effici...
    Tapio Pahikkala, Filip Ginter, Jorma Boberg, Jouni...
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    BMCBI
    2005
    155views more  BMCBI 2005»
    Mining protein function from text using term-based support vector machines
    14 years 10 months ago
    Mining protein function from text using term-based support vector machines
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    Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
    Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
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    BMCBI
    2005
    117views more  BMCBI 2005»
    HmtDB, a Human Mitochondrial Genomic Resource Based on Variability Studies Supporting Population Genetics and Biomedical Researc
    14 years 10 months ago
    HmtDB, a Human Mitochondrial Genomic Resource Based on Variability Studies Supporting Population Genetics and Biomedical Researc
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    Background: Population genetics studies based on the analysis of mtDNA and mitochondrial disease studies have produced a huge quantity of sequence data and related information. Th...
    Marcella Attimonelli, Matteo Accetturo, Monica San...
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    BMCBI
    2004
    162views more  BMCBI 2004»
    Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
    14 years 10 months ago
    Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
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    Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
    Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...
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