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» The Infinite Hidden Markov Model
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BMCBI
2006
156views more  BMCBI 2006»
14 years 11 months ago
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
PR
2008
124views more  PR 2008»
14 years 11 months ago
A daily behavior enabled hidden Markov model for human behavior understanding
This paper presents a Hierarchical Context Hidden Markov Model (HC-HMM) for behavior understanding from video streams in a nursing center. The proposed HC-HMM infers elderly behav...
Pau-Choo Chung, Chin-De Liu
BMCBI
2002
133views more  BMCBI 2002»
14 years 10 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
BMCBI
2010
99views more  BMCBI 2010»
14 years 11 months ago
Prediction of novel precursor miRNAs using a context-sensitive hidden Markov model (CSHMM)
Background: It has been apparent in the last few years that small non coding RNAs (ncRNA) play a very significant role in biological regulation. Among these microRNAs (miRNAs), 22...
Sumeet Agarwal, Candida Vaz, Alok Bhattacharya, As...
ISMB
1996
15 years 10 days ago
Parameterization Studies for the SAM and HMMER Methods of Hidden Markov Model Generation
Multiple sequence alignment of distantly related viral proteins remains a challenge to all currently available alignment methods. The hidden Markovmodel approach offers a new,flex...
Marcella A. McClure, Chris Smith, Pete Elton