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» The Logical Structure of Binding
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GCB
2005
Springer
96views Biometrics» more  GCB 2005»
15 years 3 months ago
Thermodynamics of RNA-RNA Binding
We present an extension of the standard partition function approach to RNA secondary structures that computes the probabilities Pu[i, j] that a sequence interval [i, j] is unpaired...
Ulrike Mückstein, Hakim Tafer, Jörg Hack...
BMCBI
2007
115views more  BMCBI 2007»
14 years 9 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
BMCBI
2005
118views more  BMCBI 2005»
14 years 9 months ago
Variation in structural location and amino acid conservation of functional sites in protein domain families
Background: The functional sites of a protein present important information for determining its cellular function and are fundamental in drug design. Accordingly, accurate methods...
Birgit Pils, Richard R. Copley, Jörg Schultz
PPCP
1993
15 years 1 months ago
Higher-Order Logic Programming as Constraint Logic Programming
Higher-order logic programming (HOLP) languages are particularly useful for various kinds of metaprogramming and theorem proving tasks because of the logical support for variable ...
Spiro Michaylov, Frank Pfenning
SAMOS
2004
Springer
15 years 3 months ago
A Novel Data-Path for Accelerating DSP Kernels
A high-performance data-path to implement DSP kernels is proposed in this paper. The data-path is based on a flexible, universal, and regular component to optimally exploiting both...
Michalis D. Galanis, George Theodoridis, Spyros Tr...