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    BMCBI
    2010
    150views more  BMCBI 2010»
    AMS 3.0: prediction of post-translational modifications
    14 years 10 months ago
    AMS 3.0: prediction of post-translational modifications
    Download  www.biomedcentral.com
    Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
    Subhadip Basu, Dariusz Plewczynski
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    BMCBI
    2010
    152views more  BMCBI 2010»
    A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
    14 years 10 months ago
    A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
    Download  www.biomedcentral.com
    Background: High-resolution tandem mass spectra can now be readily acquired with hybrid instruments, such as LTQ-Orbitrap and LTQ-FT, in high-throughput shotgun proteomics workflo...
    Chongle Pan, Byung-Hoon Park, William H. McDonald,...
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    NAR
    2007
    155views more  NAR 2007»
    Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
    14 years 9 months ago
    Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
    Download  influenza.big.ac.cn
    Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs...
    Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Z...
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    ISMB
    1996
    155views Computational Biology» more  ISMB 1996»
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    14 years 11 months ago
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    Download  www.aaai.org
    We have developed a hidden Markov model (HMM)to detect the protein coding regions within one megabase contiguous sequence data, registered in a database called GenBankin eight ent...
    Tetsushi Yada, Makoto Hirosawa
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    BMCBI
    2008
    211views more  BMCBI 2008»
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    14 years 10 months ago
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    Download  www.biomedcentral.com
    Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
    Svetlin Manavski, Giorgio Valle
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