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» The ParTriCluster Algorithm for Gene Expression Analysis
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BMCBI
2010
110views more  BMCBI 2010»
15 years 18 days ago
TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach
Background: One of main aims of Molecular Biology is the gain of knowledge about how molecular components interact each other and to understand gene function regulations. Using mi...
Pietro Zoppoli, Sandro Morganella, Michele Ceccare...
93
Voted
PSB
2004
15 years 1 months ago
Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer
Gene expression of a cell is controlled by sophisticated cellular processes. The capability of inferring the states of these cellular processes would provide insight into the mech...
Xinghua Lu, Milos Hauskrecht, Roger S. Day
83
Voted
KDD
2004
ACM
108views Data Mining» more  KDD 2004»
16 years 26 days ago
Sleeved coclustering
A coCluster of a m?n matrix X is a submatrix determined by a subset of the rows and a subset of the columns. The problem of finding coClusters with specific properties is of inter...
Avraham A. Melkman, Eran Shaham
CVPR
2008
IEEE
16 years 2 months ago
A unified framework for generalized Linear Discriminant Analysis
Linear Discriminant Analysis (LDA) is one of the wellknown methods for supervised dimensionality reduction. Over the years, many LDA-based algorithms have been developed to cope w...
Shuiwang Ji, Jieping Ye
BMCBI
2008
137views more  BMCBI 2008»
15 years 18 days ago
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays
Background: Microarray experiments generate vast amounts of data. The functional context of differentially expressed genes can be assessed by querying the Gene Ontology (GO) datab...
Hans A. Kestler, André Müller, Johann ...