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» The ParTriCluster Algorithm for Gene Expression Analysis
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EVOW
2004
Springer
15 years 5 months ago
Evolutionary Search of Thresholds for Robust Feature Set Selection: Application to the Analysis of Microarray Data
Abstract. We deal with two important problems in pattern recognition that arise in the analysis of large datasets. While most feature subset selection methods use statistical techn...
Carlos Cotta, Christian Sloper, Pablo Moscato
99
Voted
RECOMB
2008
Springer
16 years 22 days ago
Automatic Recognition of Cells (ARC) for 3D Images of C. elegans
The development of high-resolution microscopy makes possible the high-throughput screening of cellular information, such as gene expression at single cell resolution. One of the cr...
Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim...
103
Voted
BIOCOMP
2006
15 years 1 months ago
Computational Inference of Compound-induced Anti-inflammatory Effects Across Time in an Adjuvant-induced Arthritis Rat Model
A number of diseases, such as arthritis and cardiovascular disorders impacting the lives of many people have strong inflammatory components. To elucidate the antiinflammatory mecha...
Jing Yu, Gabriel Helmlinger, Muriel Saulnier, Anna...
96
Voted
BMCBI
2006
118views more  BMCBI 2006»
15 years 14 days ago
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis
Background: Concerns are often raised about the accuracy of microarray technologies and the degree of cross-platform agreement, but there are yet no methods which can unambiguousl...
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diy...
BMCBI
2007
148views more  BMCBI 2007»
15 years 13 days ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...