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    BMCBI
    2007
    171views more  BMCBI 2007»
    An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed,
    14 years 9 months ago
    An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed,
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    Background: Identifying relevant research in an ever-growing body of published literature is becoming increasingly difficult. Establishing domain-specific knowledge bases may be a...
    Wei Yu, Ajay Yesupriya, Anja Wulf, Junfeng Qu, Mui...
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    BMCBI
    2007
    97views more  BMCBI 2007»
    SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets
    14 years 9 months ago
    SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets
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    Background: Array comparative genome hybridization (aCGH) provides information about genomic aberrations. Alterations in the DNA copy number may cause the cell to malfunction, lea...
    Carmen Lai, Hugo M. Horlings, Marc J. van de Vijve...
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    BMCBI
    2007
    176views more  BMCBI 2007»
    Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
    14 years 9 months ago
    Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
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    Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
    Marc Strickert, Nese Sreenivasulu, Björn Usad...
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    BMCBI
    2008
    159views more  BMCBI 2008»
    Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via log
    14 years 9 months ago
    Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via log
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    Background: Growing interest on biological pathways has called for new statistical methods for modeling and testing a genetic pathway effect on a health outcome. The fact that gen...
    Dawei Liu, Debashis Ghosh, Xihong Lin
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    BMCBI
    2008
    211views more  BMCBI 2008»
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    14 years 9 months ago
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
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    Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
    Svetlin Manavski, Giorgio Valle
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