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BMCBI
2010
177views more  BMCBI 2010»
14 years 10 months ago
Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman
BMCBI
2008
96views more  BMCBI 2008»
14 years 10 months ago
Novel methodology for construction and pruning of quasi-median networks
Background: Visualising the evolutionary history of a set of sequences is a challenge for molecular phylogenetics. One approach is to use undirected graphs, such as median network...
Sarah C. Ayling, Terence A. Brown
BMCBI
2006
115views more  BMCBI 2006»
14 years 10 months ago
Detecting recombination in evolving nucleotide sequences
Background: Genetic recombination can produce heterogeneous phylogenetic histories within a set of homologous genes. These recombination events can be obscured by subsequent resid...
Cheong Xin Chan, Robert G. Beiko, Mark A. Ragan
BMCBI
2006
223views more  BMCBI 2006»
14 years 10 months ago
PSMIX: an R package for population structure inference via maximum likelihood method
Background: Inference of population stratification and individual admixture from genetic markers is an integrative part of a study in diverse situations, such as association mappi...
Baolin Wu, Nianjun Liu, Hongyu Zhao
GECCO
2009
Springer
131views Optimization» more  GECCO 2009»
14 years 7 months ago
A multi-objective approach to data sharing with privacy constraints and preference based objectives
Public data sharing is utilized in a number of businesses to facilitate the exchange of information. Privacy constraints are usually enforced to prevent unwanted inference of info...
Rinku Dewri, Darrell Whitley, Indrajit Ray, Indrak...