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» The Protein Data Bank and lessons in data management
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BIB
2004
55views more  BIB 2004»
14 years 10 months ago
The Protein Data Bank and lessons in data management
Philip E. Bourne, John D. Westbrook, Helen M. Berm...
BMCBI
2002
137views more  BMCBI 2002»
14 years 10 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
BMCBI
2008
175views more  BMCBI 2008»
14 years 10 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin
ISMB
1997
14 years 11 months ago
PDB-REPRDB: A Database of Representative Protein Chains in PDB (Protein Data Bank)
Tamotsu Noguchi, Kentaro Onizuka, Yutaka Akiyama, ...
BMCBI
2005
116views more  BMCBI 2005»
14 years 10 months ago
SuperLigands - a database of ligand structures derived from the Protein Data Bank
Background: Currently, the PDB contains approximately 29,000 protein structures comprising over 70,000 experimentally determined three-dimensional structures of over 5,000 differe...
Elke Michalsky, Mathias Dunkel, Andrean Goede, Rob...