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» The Protein Data Bank and lessons in data management
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BMCBI
2008
85views more  BMCBI 2008»
14 years 9 months ago
Wanted: unique names for unique atom positions. PDB-wide analysis of diastereotopic atom names of small molecules containing dip
Background: Biological chemistry is very stereospecific. Nonetheless, the diastereotopic oxygen atoms of diphosphate-containing molecules in the Protein Data Bank (PDB) are often ...
Christopher A. Bottoms, Dong Xu
COMPLIFE
2005
Springer
15 years 3 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
FGCS
2007
106views more  FGCS 2007»
14 years 9 months ago
A parallel hybrid genetic algorithm for protein structure prediction on the computational grid
Solving the structure prediction problem for complex proteins is difficult and computationally expensive. In this paper, we propose a bicriterion parallel hybrid genetic algorith...
Alexandru-Adrian Tantar, Nouredine Melab, El-Ghaza...
WWW
2003
ACM
15 years 10 months ago
Piazza: data management infrastructure for semantic web applications
The Semantic Web envisions a World Wide Web in which data is described with rich semantics and applications can pose complex queries. To this point, researchers have defined new l...
Alon Y. Halevy, Zachary G. Ives, Peter Mork, Igor ...
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COMPUTER
2010
127views more  COMPUTER 2010»
14 years 6 months ago
Data Stream Management Systems for Computational Finance
Computational finance leverages computer technologies to build models from large amounts of data to extract insight. In today's networked world, the amount of data available t...
Badrish Chandramouli, Mohamed H. Ali, Jonathan Gol...