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» The Protein Data Bank and lessons in data management
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111
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ICS
2010
Tsinghua U.
14 years 12 months ago
The auction: optimizing banks usage in Non-Uniform Cache Architectures
The growing influence of wire delay in cache design has meant that access latencies to last-level cache banks are no longer constant. Non-Uniform Cache Architectures (NUCAs) have ...
Javier Lira, Carlos Molina, Antonio Gonzále...
BMCBI
2010
86views more  BMCBI 2010»
14 years 9 months ago
Mining protein loops using a structural alphabet and statistical exceptionality
Background: Protein loops encompass 50% of protein residues in available three-dimensional structures. These regions are often involved in protein functions, e.g. binding site, ca...
Leslie Regad, Juliette Martin, Grégory Nuel...
NAR
2007
127views more  NAR 2007»
14 years 9 months ago
The Universal Protein Resource (UniProt)
The Universal Protein Resource (UniProt) provides the scientific community with a single, centralized, authoritative resource for protein sequences and functional information. For...
BMCBI
2006
112views more  BMCBI 2006»
14 years 9 months ago
Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins
Background: We describe Distill, a suite of servers for the prediction of protein structural features: secondary structure; relative solvent accessibility; contact density; backbo...
Davide Baù, Alberto J. M. Martin, Catherine...
85
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BMCBI
2004
265views more  BMCBI 2004»
14 years 9 months ago
ASAView: Database and tool for solvent accessibility representation in proteins
Background: Accessible surface area (ASA) or solvent accessibility of amino acids in a protein has important implications. Knowledge of surface residues helps in locating potentia...
Shandar Ahmad, M. Michael Gromiha, Hamed Fawareh, ...