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» The Protein Data Bank and lessons in data management
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BMCBI
2010
98views more  BMCBI 2010»
14 years 12 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...
CONSTRAINTS
2008
182views more  CONSTRAINTS 2008»
14 years 11 months ago
Constraint Programming in Structural Bioinformatics
Bioinformatics aims at applying computer science methods to the wealth of data collected in a variety of experiments in life sciences (e.g. cell and molecular biology, biochemistry...
Pedro Barahona, Ludwig Krippahl
NAR
2006
82views more  NAR 2006»
14 years 11 months ago
The RCSB PDB information portal for structural genomics
10 The RCSB Protein Data Bank (PDB) offers online tools, summary reports and target information related to the worldwide structural genomics initiatives from its portal at http://...
Andrei Kouranov, Lei Xie, Joanna de la Cruz, Li Ch...
NAR
2000
103views more  NAR 2000»
14 years 11 months ago
The Homeodomain Resource: a prototype database for a large protein family
The Homeodomain Resource is an annotated collection of non-redundant protein sequences, three-dimensional structures and genomic information for the homeodomain protein family. Re...
Sharmila Banerjee-Basu, Joseph F. Ryan, Andreas D....
BMCBI
2006
140views more  BMCBI 2006»
14 years 11 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...