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» The Protein Data Bank and lessons in data management
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BMCBI
2005
108views more  BMCBI 2005»
14 years 9 months ago
Storing, linking, and mining microarray databases using SRS
Background: SRS (Sequence Retrieval System) has proven to be a valuable platform for storing, linking, and querying biological databases. Due to the availability of a broad range ...
Antoine Veldhoven, Don de Lange, Marcel Smid, Vict...
BMCBI
2010
161views more  BMCBI 2010»
14 years 9 months ago
FRASS: the web-server for RNA structural comparison
Background: The impressive increase of novel RNA structures, during the past few years, demands automated methods for structure comparison. While many algorithms handle only small...
Svetlana Kirillova, Silvio C. E. Tosatto, Oliviero...
SIGUCCS
2003
ACM
15 years 2 months ago
Achieving rapid service deployment in an academic environment
Rapid product or service deployment is most commonly thought of in the corporate, rather than academic, environment. Utilizing a rapid deployment process and a number of highly de...
Shea Nangle
KDD
2012
ACM
196views Data Mining» more  KDD 2012»
12 years 12 months ago
Chromatic correlation clustering
We study a novel clustering problem in which the pairwise relations between objects are categorical. This problem can be viewed as clustering the vertices of a graph whose edges a...
Francesco Bonchi, Aristides Gionis, Francesco Gull...
NAR
2011
307views Computer Vision» more  NAR 2011»
14 years 4 months ago
BRENDA, the enzyme information system in 2011
The BRENDA (BRaunschweig ENzyme Database, http://www.brenda-enzymes.org) enzyme information system is the main collection of enzyme functional and property data for the scientific...
Maurice Scheer, Andreas Grote, Antje Chang, Ida Sc...