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» The Protein Data Bank and lessons in data management
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ADC
2007
Springer
125views Database» more  ADC 2007»
15 years 3 months ago
Building a Disordered Protein Database: A Case Study in Managing Biological Data
A huge diversity of biological databases is available via the Internet, but many of these databases have been developed in an ad hoc manner rather than in accordance with any data...
Arran D. Stewart, Xiuzhen Zhang
HPDC
2008
IEEE
14 years 9 months ago
File grouping for scientific data management: lessons from experimenting with real traces
Abstract-The analysis of data usage in a large set of real traces from a high-energy physics collaboration revealed the existence of an emergent grouping of files that we coined &q...
Shyamala Doraimani, Adriana Iamnitchi
BMCBI
2007
154views more  BMCBI 2007»
14 years 9 months ago
PepBank - a database of peptides based on sequence text mining and public peptide data sources
Background: Peptides are important molecules with diverse biological functions and biomedical uses. To date, there does not exist a single, searchable archive for peptide sequence...
Timur Shtatland, Daniel Guettler, Misha Kossodo, M...
CIT
2004
Springer
15 years 1 months ago
Adaptive Neural Network-Based Clustering of Yeast Protein-Protein Interactions
Abstract. In this paper, we presents an adaptive neural network based clustering method to group protein
Jae-Hong Eom, Byoung-Tak Zhang
RECOMB
2001
Springer
15 years 9 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...