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» The Protein Data Bank and lessons in data management
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DAWAK
2000
Springer
15 years 1 months ago
COFE: A Scalable Method for Feature Extraction from Complex Objects
Abstract. Feature Extraction, also known as Multidimensional Scaling, is a basic primitive associated with indexing, clustering, nearest neighbor searching and visualization. We co...
Gabriela Hristescu, Martin Farach-Colton
ITSSA
2006
182views more  ITSSA 2006»
14 years 9 months ago
Application of Business Process Execution Language to Scientific Workflows
: This paper investigates the use of the Business Process Execution Language for Web services (BPEL4WS/ BPEL) for managing scientific workflows. The complexity, unpredictability an...
Asif Akram, David Meredith, Rob Allan
ICDT
2003
ACM
150views Database» more  ICDT 2003»
15 years 2 months ago
Bioinformatics Adventures in Database Research
Informatics has helped launch molecular biology into the genomic era. It appears certain that informatics will remain a major contributor to molecular biology in the post-genome er...
Jinyan Li, See-Kiong Ng, Limsoon Wong
BMCBI
2010
121views more  BMCBI 2010»
14 years 6 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
NAR
2006
83views more  NAR 2006»
14 years 9 months ago
KOBAS server: a web-based platform for automated annotation and pathway identification
There is an increasing need to automatically annotate a set of genes or proteins (from genome sequencing, DNA microarray analysis or protein 2D gel experiments) using controlled v...
Jianmin Wu, Xizeng Mao, Tao Cai, Jingchu Luo, Lipi...