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110
Voted
SDM
2010
SIAM
192views Data Mining» more  SDM 2010»
15 years 2 months ago
Fast and Accurate Gene Prediction by Decision Tree Classification
Gene prediction is one of the most challenging tasks in genome analysis, for which many tools have been developed and are still evolving. In this paper, we present a novel gene pr...
Rong She, Jeffrey Shih-Chieh Chu, Ke Wang, Nanshen...
99
Voted
BMCBI
2010
150views more  BMCBI 2010»
15 years 9 days ago
DeltaProt: a software toolbox for comparative genomics
Background: Statistical bioinformatics is the study of biological data sets obtained by new micro-technologies by means of proper statistical methods. For a better understanding o...
Steinar Thorvaldsen, Tor Flå, Nils Willassen
80
Voted
BIBE
2000
IEEE
15 years 4 months ago
Mining Residue Contacts in Proteins
In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical nucleationpropagation model of p...
Mohammed Javeed Zaki, Shan Jin, Chris Bystroff
142
Voted
BMCBI
2005
118views more  BMCBI 2005»
15 years 18 days ago
Feature selection and nearest centroid classification for protein mass spectrometry
Background: The use of mass spectrometry as a proteomics tool is poised to revolutionize early disease diagnosis and biomarker identification. Unfortunately, before standard super...
Ilya Levner
SAC
2005
ACM
15 years 6 months ago
Graphical rule-based representation of signal-transduction networks
The process by which a cell senses and responds to its environment, as in signal transduction, is often mediated by a network of protein-protein interactions, in which proteins co...
James R. Faeder, Michael L. Blinov, William S. Hla...