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113
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BMCBI
2005
93views more  BMCBI 2005»
15 years 20 days ago
SPdb - a signal peptide database
Background: The signal peptide plays an important role in protein targeting and protein translocation in both prokaryotic and eukaryotic cells. This transient, short peptide seque...
Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan
90
Voted
ISBI
2009
IEEE
15 years 7 months ago
Automated Analysis of Human Protein Atlas Immunofluorescence Images
The Human Protein Atlas is a rich source of location proteomics data. In this work, we present an automated approach for processing and classifying major subcellular patterns in t...
Justin Newberg, Jieyue Li, Arvind Rao, Fredrik Pon...
111
Voted
ICDE
2005
IEEE
126views Database» more  ICDE 2005»
15 years 6 months ago
ProtChew: Automatic Extraction of Protein Names from Biomedical Literature
With the increasing amount of biomedical literature, there is a need for automatic extraction of information to support biomedical researchers. Due to incomplete biomedical inform...
Amund Tveit, Rune Sætre, Astrid Lægrei...
129
Voted
NIPS
2008
15 years 2 months ago
Predicting the Geometry of Metal Binding Sites from Protein Sequence
Metal binding is important for the structural and functional characterization of proteins. Previous prediction efforts have only focused on bonding state, i.e. deciding which prot...
Paolo Frasconi, Andrea Passerini
92
Voted
ISMB
2000
15 years 2 months ago
Prediction of the Number of Residue Contacts in Proteins
Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
Piero Fariselli, Rita Casadio