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97
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RECOMB
2003
Springer
16 years 1 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona
110
Voted
KDD
2009
ACM
175views Data Mining» more  KDD 2009»
15 years 5 months ago
Multi-class protein fold recognition using large margin logic based divide and conquer learning
Inductive Logic Programming (ILP) systems have been successfully applied to solve complex problems in bioinformatics by viewing them as binary classification tasks. It remains an...
Huma Lodhi, Stephen Muggleton, Michael J. E. Stern...
136
Voted
DILS
2006
Springer
15 years 4 months ago
Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions
Linking the biomedical literature to other data resources is notoriously difficult and requires text mining. Text mining aims to automatically extract facts from literature. Since ...
Tobias Kuhn, Loïc Royer, Norbert E. Fuchs, Mi...
86
Voted
BMCBI
2007
92views more  BMCBI 2007»
15 years 23 days ago
Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription fa
Background: Synthetic transcription factors (STFs) promise to offer a powerful new therapeutic against Cancer, AIDS, and genetic disease. Currently, 10% of drugs are of this type,...
Stephen Winters-Hilt, Amanda Davis, Iftekhar Amin,...
101
Voted
NAR
1998
101views more  NAR 1998»
15 years 12 days ago
The PRINTS protein fingerprint database in its fifth year
PRINTS is a database of protein family ‘fingerprints’ offering a diagnostic resource for newly-determined sequences. By contrast with PROSITE, which uses single consensus expr...
Terri K. Attwood, Michael E. Beck, Darren R. Flowe...