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105
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RECOMB
2005
Springer
16 years 1 months ago
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
Tommy Kaplan, Nir Friedman, Hanah Margalit
85
Voted
RECOMB
2004
Springer
16 years 1 months ago
Discovering temporal relations in molecular pathways using protein-protein interactions
The availability of large-scale protein-protein interaction data provides us with many opportunities to study molecular pathways involving proteins. In this paper we propose to mi...
Martin Farach-Colton, Yang Huang, John L. L. Woolf...
74
Voted
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
15 years 6 months ago
Visualization of Logic Analysis of Phylogenetic Profiles (LAPP)
Recently Bowers et al. [1] analyzed triplet logic relationships among 4873 Clusters of Orthologous Groups (COGS) from 67 fully sequenced organisms by calculating how well logic re...
Kay A. Robbins, Li Zhao
85
Voted
NIPS
2004
15 years 2 months ago
Large-Scale Prediction of Disulphide Bond Connectivity
The formation of disulphide bridges among cysteines is an important feature of protein structures. Here we develop new methods for the prediction of disulphide bond connectivity. ...
Pierre Baldi, Jianlin Cheng, Alessandro Vullo
106
Voted
JCIT
2008
108views more  JCIT 2008»
15 years 24 days ago
Data Mining for Genetics: A Genetic Algorithm Approach
MINING biological data is an emerging area of intersection between data mining and bioinformatics. Bio-informaticians have been working on the research and development of computat...
G. Madhu, Keshava Reddy