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CIBCB
2006
IEEE
15 years 6 months ago
Aggregating Homologous Protein Families in Evolutionary Reconstructions of Herpesviruses
Abstract–Protein families can be used to reconstruct evolutionary histories of organisms. The accuracy of protein assignment to such families is critical for the success of such ...
Boris Mirkin, Renata da Silva Camargo, Trevor I. F...
113
Voted
IJDMB
2007
110views more  IJDMB 2007»
15 years 12 days ago
Transductive learning with EM algorithm to classify proteins based on phylogenetic profiles
: Phylogenetic profiles of proteins  strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes  have recently been used to id...
Roger A. Craig, Li Liao
BIBM
2009
IEEE
140views Bioinformatics» more  BIBM 2009»
15 years 3 months ago
A Protein-Protein Interaction Prediction Method Embracing Intra-protein Domain Cohesion Information
Recently, many computational methods for predicting protein-protein interaction (PPI) have been developed by utilizing domain-domain interaction or associated information. However...
Woo-Hyuk Jang, Suk Hoon Jung, Bo-ra Hyun, Dong-Soo...
103
Voted
BMCBI
2007
168views more  BMCBI 2007»
15 years 18 days ago
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks
Background: Uncovering cellular roles of a protein is a task of tremendous importance and complexity that requires dedicated experimental work as well as often sophisticated data ...
Nikolai Daraselia, Anton Yuryev, Sergei Egorov, Il...
82
Voted
BMCBI
2007
135views more  BMCBI 2007»
15 years 18 days ago
UbiProt: a database of ubiquitylated proteins
Background: Post-translational protein modification with ubiquitin, or ubiquitylation, is one of the hottest topics in a modern biology due to a dramatic impact on diverse metabol...
Alexander L. Chernorudskiy, Alejandro Garcia, Euge...