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ICARIS
2004
Springer
15 years 6 months ago
A Fractal Immune Network
Proteins are the driving force in development (embryogenesis) and the immune system. Here we describe how a model of proteins designed for evolutionary development in computers can...
Peter J. Bentley, Jon Timmis
90
Voted
IJON
2006
103views more  IJON 2006»
15 years 17 days ago
Kernel extrapolation
We present a framework for efficient extrapolation of reduced rank approximations, graph kernels, and locally linear embeddings (LLE) to unseen data. We also present a principled ...
S. V. N. Vishwanathan, Karsten M. Borgwardt, Omri ...
62
Voted
NAR
2011
162views Computer Vision» more  NAR 2011»
14 years 3 months ago
BSDB: the biomolecule stretching database
We describe the Biomolecule Stretching Data Base that has been recently set up at http://www.ifpan .edu.pl/BSDB/. It provides information about mechanostability of proteins. Its c...
Mateusz Sikora, Joanna I. Sulkowska, Bartlomiej S....
110
Voted
BMCBI
2008
141views more  BMCBI 2008»
15 years 21 days ago
Functional discrimination of membrane proteins using machine learning techniques
Background: Discriminating membrane proteins based on their functions is an important task in genome annotation. In this work, we have analyzed the characteristic features of amin...
M. Michael Gromiha, Yukimitsu Yabuki
113
Voted
BMCBI
2007
142views more  BMCBI 2007»
15 years 17 days ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto