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» The Refined Process Structure Tree
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141
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PVLDB
2010
136views more  PVLDB 2010»
15 years 2 months ago
SigMatch: Fast and Scalable Multi-Pattern Matching
Multi-pattern matching involves matching a data item against a large database of “signature” patterns. Existing algorithms for multipattern matching do not scale well as the s...
Ramakrishnan Kandhan, Nikhil Teletia, Jignesh M. P...
141
Voted
SODA
2012
ACM
208views Algorithms» more  SODA 2012»
13 years 6 months ago
Partial match queries in random quadtrees
We consider the problem of recovering items matching a partially specified pattern in multidimensional trees (quad trees and k-d trees). We assume the traditional model where the...
Nicolas Broutin, Ralph Neininger, Henning Sulzbach
128
Voted
BMCBI
2007
95views more  BMCBI 2007»
15 years 3 months ago
ZPS: visualization of recent adaptive evolution of proteins
Background: Detection of adaptive amino acid changes in proteins under recent short-term selection is of great interest for researchers studying microevolutionary processes in mic...
Sujay Chattopadhyay, Daniel E. Dykhuizen, Evgeni V...
120
Voted
BMCBI
2010
160views more  BMCBI 2010»
15 years 3 months ago
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
Background: Protein-protein interactions play a key role in biological processes of proteins within a cell. Recent high-throughput techniques have generated protein-protein intera...
Young-Rae Cho, Aidong Zhang
169
Voted
EDBT
2012
ACM
257views Database» more  EDBT 2012»
13 years 6 months ago
Indexing and mining topological patterns for drug discovery
Increased availability of large repositories of chemical compounds has created new challenges and opportunities for the application of data-mining and indexing techniques to probl...
Sayan Ranu, Ambuj K. Singh