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BMCBI
2010
130views more  BMCBI 2010»
14 years 12 months ago
Knowledge-guided gene ranking by coordinative component analysis
Background: In cancer, gene networks and pathways often exhibit dynamic behavior, particularly during the process of carcinogenesis. Thus, it is important to prioritize those gene...
Chen Wang, Jianhua Xuan, Huai Li, Yue Wang, Ming Z...
BMCBI
2007
130views more  BMCBI 2007»
14 years 12 months ago
A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
BMCBI
2008
103views more  BMCBI 2008»
14 years 12 months ago
The VirusBanker database uses a Java program to allow flexible searching through Bunyaviridae sequences
Background: Viruses of the Bunyaviridae have segmented negative-stranded RNA genomes and several of them cause significant disease. Many partial sequences have been obtained from ...
Mathieu Fourment, Mark J. Gibbs
118
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CORR
2010
Springer
182views Education» more  CORR 2010»
14 years 12 months ago
Index coding via linear programming
Abstract Anna Blasiak Robert Kleinberg Eyal Lubetzky Index Coding has received considerable attention recently motivated in part by applications such as fast video-on-demand and e...
Anna Blasiak, Robert D. Kleinberg, Eyal Lubetzky
DAM
2010
112views more  DAM 2010»
14 years 12 months ago
New results on optimizing rooted triplets consistency
Abstract. A set of phylogenetic trees with overlapping leaf sets is consistent if it can be merged without conflicts into a supertree. In this paper, we study the polynomial-time a...
Jaroslaw Byrka, Sylvain Guillemot, Jesper Jansson