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BIOINFORMATICS
2010
170views more  BIOINFORMATICS 2010»
15 years 4 months ago
Joint estimation of DNA copy number from multiple platforms
DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li
BMCBI
2010
91views more  BMCBI 2010»
15 years 4 months ago
Algorithm-driven Artifacts in median polish summarization of Microarray data
Background: High-throughput measurement of transcript intensities using Affymetrix type oligonucleotide microarrays has produced a massive quantity of data during the last decade....
Federico M. Giorgi, Anthony M. Bolger, Marc Lohse,...
BMCBI
2008
112views more  BMCBI 2008»
15 years 4 months ago
Normalization for triple-target microarray experiments
Background: Most microarray studies are made using labelling with one or two dyes which allows the hybridization of one or two samples on the same slide. In such experiments, the ...
Marie-Laure Martin-Magniette, Julie Aubert, Avner ...
BMCBI
2006
116views more  BMCBI 2006»
15 years 4 months ago
Integrative missing value estimation for microarray data
Background: Missing value estimation is an important preprocessing step in microarray analysis. Although several methods have been developed to solve this problem, their performan...
Jianjun Hu, Haifeng Li, Michael S. Waterman, Xiang...
ENGL
2007
180views more  ENGL 2007»
15 years 4 months ago
Biological Data Mining for Genomic Clustering Using Unsupervised Neural Learning
— The paper aims at designing a scheme for automatic identification of a species from its genome sequence. A set of 64 three-tuple keywords is first generated using the four type...
Shreyas Sen, Seetharam Narasimhan, Amit Konar