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105
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BMCBI
2008
124views more  BMCBI 2008»
15 years 2 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...
100
Voted
BMCBI
2007
155views more  BMCBI 2007»
15 years 2 months ago
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, W...
130
Voted
CORR
2007
Springer
105views Education» more  CORR 2007»
15 years 2 months ago
Relative-Error CUR Matrix Decompositions
Many data analysis applications deal with large matrices and involve approximating the matrix using a small number of “components.” Typically, these components are linear combi...
Petros Drineas, Michael W. Mahoney, S. Muthukrishn...
110
Voted
BMCBI
2005
126views more  BMCBI 2005»
15 years 2 months ago
An algorithm for automatic evaluation of the spot quality in two-color DNA microarray experiments
Background: Although DNA microarray technologies are very powerful for the simultaneous quantitative characterization of thousands of genes, the quality of the obtained experiment...
Eugene Novikov, Emmanuel Barillot
135
Voted
BMCBI
2002
136views more  BMCBI 2002»
15 years 2 months ago
Making sense of EST sequences by CLOBBing them
Background: Expressed sequence tags (ESTs) are single pass reads from randomly selected cDNA clones. They provide a highly cost-effective method to access and identify expressed g...
John Parkinson, David B. Guiliano, Mark L. Blaxter