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BIOINFORMATICS
2005
72views more  BIOINFORMATICS 2005»
15 years 1 months ago
Use of within-array replicate spots for assessing differential expression in microarray experiments
Motivation. Spotted arrays are often printed with probes in duplicate or triplicate, but current methods for assessing differential expression are not able to make full use of the...
Gordon K. Smyth, Joëlle Michaud, Hamish S. Sc...
BMCBI
2005
126views more  BMCBI 2005»
15 years 1 months ago
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
Robert G. Beiko, Robert L. Charlebois
BMCBI
2005
104views more  BMCBI 2005»
15 years 1 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
TMI
2008
171views more  TMI 2008»
15 years 1 months ago
Fluid Registration of Diffusion Tensor Images Using Information Theory
We apply an information-theoretic cost metric, the symmetrized Kullback-Leibler (sKL) divergence, or -divergence, to fluid registration of diffusion tensor images. The difference b...
Ming-Chang Chiang, Alex D. Leow, Andrea D. Klunder...
JCP
2007
117views more  JCP 2007»
15 years 1 months ago
Internet Research Support System: An Application for Immediate Feedback in Authentic Internet Research
– A prototype Internet Research Support System is presented based on earlier work on the modeling of online reading behavior and evaluating the reading process and its outcomes. ...
Nasiroh Omar, Colin Higgins, Colin G. Harrison, Di...
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