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» The Stardinates - Visualizing Highly Structured Data
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RECOMB
2004
Springer
16 years 2 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
RECOMB
2003
Springer
16 years 2 months ago
An integrated probabilistic model for functional prediction of proteins
We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
Minghua Deng, Ting Chen, Fengzhu Sun
VLDB
2007
ACM
155views Database» more  VLDB 2007»
16 years 2 months ago
Towards Graph Containment Search and Indexing
Given a set of model graphs D and a query graph q, containment search aims to find all model graphs g D such that q contains g (q g). Due to the wide adoption of graph models, f...
Chen Chen, Xifeng Yan, Philip S. Yu, Jiawei Han, D...
SIGMOD
2005
ACM
119views Database» more  SIGMOD 2005»
16 years 2 months ago
Update-Pattern-Aware Modeling and Processing of Continuous Queries
A defining characteristic of continuous queries over on-line data streams, possibly bounded by sliding windows, is the potentially infinite and time-evolving nature of their input...
Lukasz Golab, M. Tamer Özsu
SIGCOMM
2009
ACM
15 years 8 months ago
PLUG: flexible lookup modules for rapid deployment of new protocols in high-speed routers
New protocols for the data link and network layer are being proposed to address limitations of current protocols in terms of scalability, security, and manageability. High-speed r...
Lorenzo De Carli, Yi Pan, Amit Kumar, Cristian Est...