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CPM
2004
Springer
156views Combinatorics» more  CPM 2004»
15 years 3 months ago
A Computational Model for RNA Multiple Structural Alignment.
Abstract. This paper addresses the problem of aligning multiple sequences of non-coding RNA genes. We approach this problem with the biologically motivated paradigm that scoring of...
Eugene Davydov, Serafim Batzoglou
ICASSP
2011
IEEE
14 years 1 months ago
Computing room acoustics with CUDA - 3D FDTD schemes with boundary losses and viscosity
In seeking to model realistic room acoustics, direct numerical simulation can be employed. This paper presents 3D Finite Difference Time Domain schemes that incorporate losses at ...
Craig J. Webb, Stefan Bilbao
FPGA
1999
ACM
142views FPGA» more  FPGA 1999»
15 years 2 months ago
Multi-Terminal Net Routing for Partial Crossbar-Based Multi-FPGA Systems
Multi-FPGA systems are used as custom computing machines to solve compute intensive problems and also in the verification and prototyping of large circuits. In this paper, we addr...
Abdel Ejnioui, N. Ranganathan
CCGRID
2007
IEEE
15 years 4 months ago
Performance Evaluation in Grid Computing: A Modeling and Prediction Perspective
Experimental performance studies on computer systems, including Grids, require deep understandings on their workload characteristics. The need arises from two important and closel...
Hui Li
SPIN
2004
Springer
15 years 3 months ago
Explicit State Model Checking with Hopper
The Murϕ-based Hopper tool is a general purpose explicit model checker. Hopper leverages Murϕ’s class structure to implement new algorithms. Hopper differs from Murϕ in that i...
Michael Jones, Eric Mercer