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RECOMB
2007
Springer
16 years 11 days ago
Improving Inversion Median Computation Using Commuting Reversals and Cycle Information
In the past decade, genome rearrangements have attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. Methods ...
William Arndt, Jijun Tang
RECOMB
2006
Springer
16 years 11 days ago
A Study of Accessible Motifs and RNA Folding Complexity
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Zi...
ICCAD
2003
IEEE
170views Hardware» more  ICCAD 2003»
15 years 9 months ago
Evaluation of Placement Techniques for DNA Probe Array Layout
DNA probe arrays have emerged as a core genomic technology that enables cost-effective gene expression monitoring, mutation detection, single nucleotide polymorphism analysis and ...
Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu ...
IPPS
2009
IEEE
15 years 6 months ago
DMTCP: Transparent checkpointing for cluster computations and the desktop
DMTCP (Distributed MultiThreaded CheckPointing) is a transparent user-level checkpointing package for distributed applications. Checkpointing and restart is demonstrated for a wid...
Jason Ansel, Kapil Arya, Gene Cooperman
IV
2008
IEEE
296views Visualization» more  IV 2008»
15 years 6 months ago
Revealing Subnetwork Roles using Contextual Visualization: Comparison of Metabolic Networks
This article is addressing a recurrent problem in biology: mining newly built large scale networks. Our approach consists in comparing these new networks to well known ones. The v...
Romain Bourqui, Fabien Jourdan