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» The Web as a Graph: Measurements, Models, and Methods
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SOFTVIS
2003
ACM
15 years 3 months ago
Nice Class Diagrams Admit Good Design?
Analysis and design of programs by using tools has emerged to a standard technique in object-oriented software engineering. Many of these tools claim to implement methods accordin...
Holger Eichelberger
BMCBI
2010
133views more  BMCBI 2010»
14 years 9 months ago
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
Background: Many structural properties such as solvent accessibility, dihedral angles and helix-helix contacts can be assigned to each residue in a membrane protein. Independent s...
Shandar Ahmad, Yumlembam Hemjit Singh, Yogesh Paud...
BMCBI
2007
122views more  BMCBI 2007»
14 years 9 months ago
TAP score: torsion angle propensity normalization applied to local protein structure evaluation
Background: Experimentally determined protein structures may contain errors and require validation. Conformational criteria based on the Ramachandran plot are mainly used to disti...
Silvio C. E. Tosatto, Roberto Battistutta
WSDM
2012
ACM
243views Data Mining» more  WSDM 2012»
13 years 5 months ago
No search result left behind: branching behavior with browser tabs
Today’s Web browsers allow users to open links in new windows or tabs. This action, which we call ‘branching’, is sometimes performed on search results when the user plans t...
Jeff Huang, Thomas Lin, Ryen W. White
BMCBI
2010
142views more  BMCBI 2010»
14 years 9 months ago
Discover Protein Complexes in Protein-Protein Interaction Networks Using Parametric Local Modularity
Background: Recent advances in proteomic technologies have enabled us to create detailed protein-protein interaction maps in multiple species and in both normal and diseased cells...
Jongkwang Kim, Kai Tan