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» The complexity of stochastic sequences
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BMCBI
2011
14 years 7 months ago
Using Stochastic Causal Trees to Augment Bayesian Networks for Modeling eQTL Datasets
Background: The combination of genotypic and genome-wide expression data arising from segregating populations offers an unprecedented opportunity to model and dissect complex phen...
Kyle C. Chipman, Ambuj K. Singh
CANDC
2002
ACM
14 years 11 months ago
Applications of Recursive Segmentation to the Analysis of DNA Sequences
Recursive segmentation is a procedure that partitions a DNA sequence into domains with a homogeneous composition of the four nucleotides A, C, G and T. This procedure can also be ...
Wentian Li, Pedro Bernaola-Galván, Fatameh ...
TCS
2010
14 years 6 months ago
Information measures for infinite sequences
We revisit the notion of computational depth and sophistication for infinite sequences and study the density of the sets of deep and sophisticated infinite sequences. Koppel defin...
Luis Filipe Coelho Antunes, Andre Souto
ICDE
2006
IEEE
178views Database» more  ICDE 2006»
16 years 1 months ago
Declarative Querying for Biological Sequences
The ongoing revolution in life sciences research is producing vast amounts of genetic and proteomic sequence data. Scientists want to pose increasingly complex queries on this dat...
Sandeep Tata, Jignesh M. Patel, James S. Friedman,...
BIBM
2010
IEEE
139views Bioinformatics» more  BIBM 2010»
14 years 9 months ago
Scalable, updatable predictive models for sequence data
The emergence of data rich domains has led to an exponential growth in the size and number of data repositories, offering exciting opportunities to learn from the data using machin...
Neeraj Koul, Ngot Bui, Vasant Honavar