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    BMCBI
    2005
    151views more  BMCBI 2005»
    stam - a Bioconductor compliant R package for structured analysis of microarray data
    14 years 9 months ago
    stam - a Bioconductor compliant R package for structured analysis of microarray data
    Download  www.biomedcentral.com
    Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
    Claudio Lottaz, Rainer Spang
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    BMCBI
    2005
    107views more  BMCBI 2005»
    An edit script for taxonomic classifications
    14 years 9 months ago
    An edit script for taxonomic classifications
    Download  taxonomy.zoology.gla.ac.uk
    Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
    Roderic D. M. Page, Gabriel Valiente
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    BMCBI
    2005
    82views more  BMCBI 2005»
    Quality assessment of microarrays: Visualization of spatial artifacts and quantitation of regional biases
    14 years 9 months ago
    Quality assessment of microarrays: Visualization of spatial artifacts and quantitation of regional biases
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    Background: Quality-control is an important issue in the analysis of gene expression microarrays. One type of problem is regional bias, in which one region of a chip shows artifac...
    Mark Reimers, John N. Weinstein
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    BMCBI
    2005
    100views more  BMCBI 2005»
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
    14 years 9 months ago
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
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    Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
    Elena Rivas
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    BMCBI
    2005
    102views more  BMCBI 2005»
    BioCreAtIvE Task1A: entity identification with a stochastic tagger
    14 years 9 months ago
    BioCreAtIvE Task1A: entity identification with a stochastic tagger
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    Background: Our approach to Task 1A was inspired by Tanabe and Wilbur's ABGene system [1,2]. Like Tanabe and Wilbur, we approached the problem as one of part-of-speech taggin...
    Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Og...
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