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» The effect of sequence quality on sequence alignment
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77
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GECCO
2006
Springer
171views Optimization» more  GECCO 2006»
15 years 3 months ago
A hybrid genetic search for multiple sequence alignment
This paper proposes a hybrid genetic algorithm for multiple sequence alignment. The algorithm evolves guide sequences and aligns input sequences based on the guide sequences. It a...
Seung-Hyun Moon, Sung-Soon Choi, Byung Ro Moon
JPDC
2007
167views more  JPDC 2007»
14 years 11 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
107
Voted
JCB
2000
101views more  JCB 2000»
14 years 11 months ago
Evaluation Measures of Multiple Sequence Alignments
Multiple sequence alignments (MSAs) are frequently used in the study of families of protein sequences or DNA/RNA sequences. They are a fundamental tool for the understanding of th...
Gaston H. Gonnet, Chantal Korostensky, Steven A. B...
AAAI
2012
13 years 2 months ago
Online Sequence Alignment for Real-Time Audio Transcription by Non-Experts
Real-time transcription provides deaf and hard of hearing people visual access to spoken content, such as classroom instruction, and other live events. Currently, the only reliabl...
Walter S. Lasecki, Christopher D. Miller, Donato B...
CSB
2003
IEEE
15 years 4 months ago
Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences
We describe a method for finding ungapped conserved words in rRNA sequences that is effective, utilizes evolutionary information and does not depend on multiple sequence alignment...
Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Ji...