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» The effect of sequence quality on sequence alignment
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ICDE
2003
IEEE
247views Database» more  ICDE 2003»
16 years 1 months ago
CLUSEQ: Efficient and Effective Sequence Clustering
Analyzing sequence data has become increasingly important recently in the area of biological sequences, text documents, web access logs, etc. In this paper, we investigate the pro...
Jiong Yang, Wei Wang 0010
RECOMB
2008
Springer
16 years 9 hour ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
BMCBI
2011
14 years 3 months ago
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping
Background: Second generation sequencing technologies yield DNA sequence data at ultra high-throughput. Common to most biological applications is a mapping of the reads to an almo...
Manuel Holtgrewe, Anne-Katrin Emde, David Weese, K...
76
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ICPR
2006
IEEE
16 years 24 days ago
Change detection in streetscapes from GPS coordinated omni-directional image sequences
As part of ITS technology, to achieve quick map updates, we propose a method for automatically detecting changes in streetscapes from images captured by car-mounted omnidirectiona...
Hiroshi Murase, Ichiro Ide, Junji Sato, Tomokazu T...
BMCBI
2010
126views more  BMCBI 2010»
14 years 11 months ago
Cgaln: fast and space-efficient whole-genome alignment
Background: Whole-genome sequence alignment is an essential process for extracting valuable information about the functions, evolution, and peculiarities of genomes under investig...
Ryuichiro Nakato, Osamu Gotoh