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» The effect of sequence quality on sequence alignment
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BMCBI
2007
105views more  BMCBI 2007»
14 years 11 months ago
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences
Background: The secondary structure of an RNA must be known before the relationship between its structure and function can be determined. One way to predict the secondary structur...
Stefan Engelen, Fariza Tahi
BIBE
2006
IEEE
132views Bioinformatics» more  BIBE 2006»
15 years 5 months ago
Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
Ribonucleic acid (RNA) molecules contain the genetic information that regulates the functions of organisms. Given two different molecules, a preserved function corresponds to a pr...
Rimon Mikhaiel, Guohui Lin, Eleni Stroulia
IMCSIT
2010
14 years 9 months ago
TREF - TRanslation Enhancement Framework for Japanese-English
Abstract--We present a method for improving existing statistical machine translation methods using an knowledge-base compiled from a bilingual corpus as well as sequence alignment ...
Bartholomäus Wloka, Werner Winiwarter
BMCBI
2007
117views more  BMCBI 2007»
14 years 11 months ago
Supervised multivariate analysis of sequence groups to identify specificity determining residues
Background: Proteins that evolve from a common ancestor can change functionality over time, and it is important to be able identify residues that cause this change. In this paper ...
Iain M. Wallace, Desmond G. Higgins
ICDM
2006
IEEE
108views Data Mining» more  ICDM 2006»
15 years 5 months ago
Spatial Multidimensional Sequence Clustering
Measurements at different time points and positions in large temporal or spatial databases requires effective and efficient data mining techniques. For several parallel measureme...
Ira Assent, Ralph Krieger, Boris Glavic, Thomas Se...